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Custom sections in RQM - using RPE

I am using RPE to create templates for RQM. I understand that the custom section has to be in the template and not individual test plan or test case. My problem is that I'm seeing multiple versions of a given section in the data schema. I'm thinking this might be because we have multiple templates, but I'm not sure. Is there a way to delete the custom sections from the schema and start over? It just seems to be adding on the custom sections repetitively.