Attempting to run repairMultipleVersionsMarkedAsCurrent on 6.0.2 for upgrade to 6.0.4 and failing to initialize

Here is the stack trace from the repotools-rm_repairMultipleVersionsMarkedAsCurrent.log:

2017-06-15 08:37:22,181 Error initializing service.
com.ibm.team.repository.common.transport.internal.registry.ServiceNotFoundException: The service 'com.ibm.t
eam.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager@adafa4ad' failed to find the requ
ired service 'interface com.ibm.team.repository.service.internal.IComponentMetadataProviderManagerService'.
  Check <prerequisites> in plugin.xml.
        at com.ibm.team.repository.service.AbstractService.getService(AbstractService.java:788)
        at com.ibm.team.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager.getVersionTab
le(FoundationVVCConfigurationManager.java:291)
        at com.ibm.team.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager.access$21(Fou
ndationVVCConfigurationManager.java:288)
        at com.ibm.team.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager$28.run(Founda
tionVVCConfigurationManager.java:6160)
        at com.ibm.team.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager$28.run(Founda
tionVVCConfigurationManager.java:1)
        at com.ibm.team.repository.service.internal.rdb.RepositoryDatabase$Transaction.run(RepositoryDataba
se.java:570)
        at com.ibm.team.repository.service.internal.rdb.RepositoryDatabase$2.run(RepositoryDatabase.java:35
4)
        at com.ibm.team.repository.service.internal.rdb.ConnectionPoolService.withCurrentConnection(Connect
ionPoolService.java:476)
        at sun.reflect.GeneratedMethodAccessor85.invoke(null)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.invoke(ExportProxyServiceReco
rd.java:361)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.access$0(ExportProxyServiceRe
cord.java:347)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord$ExportedServiceInvocationHand
ler.invoke(ExportProxyServiceRecord.java:56)
        at com.sun.proxy.$Proxy138.withCurrentConnection(null)
        at com.ibm.team.repository.service.internal.rdb.RepositoryDatabase.runTransaction(RepositoryDatabas
e.java:351)
        at com.ibm.team.repository.service.internal.rdb.RepositoryDatabase.runInTransaction(RepositoryDatab
ase.java:291)
        at com.ibm.team.repository.service.internal.PrimitiveTransactionService.runInTransaction(PrimitiveT
ransactionService.java:103)
        at sun.reflect.GeneratedMethodAccessor97.invoke(null)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.invoke(ExportProxyServiceReco
rd.java:361)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.access$0(ExportProxyServiceRe
cord.java:347)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord$ExportedServiceInvocationHand
ler.invoke(ExportProxyServiceRecord.java:56)
        at com.sun.proxy.$Proxy164.runInTransaction(null)
        at com.ibm.team.repository.service.internal.TransactionService.runInTransaction(TransactionService.
java:45)
at sun.reflect.GeneratedMethodAccessor579.invoke(null)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.invoke(ExportProxyServiceReco
rd.java:361)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.access$0(ExportProxyServiceRe
cord.java:347)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord$ExportedServiceInvocationHand
ler.invoke(ExportProxyServiceRecord.java:56)
        at com.sun.proxy.$Proxy1042.runInTransaction(null)
        at com.ibm.team.repository.service.vvc.sdk.internal.FoundationVVCConfigurationManager.repairMultipl
eVersionsMarkedAsCurrent(FoundationVVCConfigurationManager.java:6157)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.invoke(ExportProxyServiceReco
rd.java:361)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord.access$0(ExportProxyServiceRe
cord.java:347)
        at org.eclipse.soda.sat.core.internal.record.ExportProxyServiceRecord$ExportedServiceInvocationHand
ler.invoke(ExportProxyServiceRecord.java:56)
        at com.sun.proxy.$Proxy1106.repairMultipleVersionsMarkedAsCurrent(null)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.handleMethod(AbstractTeamServerServlet.java:1465)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.executeMethod(AbstractTeamServerServlet.java:1018)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.doPost(AbstractTeamServerServlet.java:785)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:595)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.handleRequest2(AbstractTeamServerServlet.java:2527)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.handleRequest(AbstractTeamServerServlet.java:2315)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.access$0(AbstractTeamServerServlet.java:2300)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet$1.service(AbstractTeamServerServlet.java:248)
        at com.ibm.team.repository.service.internal.compatibility.auth.DelegatedAuthHandlerService$1.run(DelegatedAuthHandlerService.java:252)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.handleAuthentication(AbstractTeamServerServlet.java:2018)
        at com.ibm.team.repository.servlet.AbstractTeamServerServlet.service(AbstractTeamServerServlet.java:1768)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:668)
        at org.eclipse.equinox.http.registry.internal.ServletManager$ServletWrapper.service(ServletManager.java:180)
        at org.eclipse.equinox.http.servlet.internal.ServletRegistration.service(ServletRegistration.java:61)
        at org.eclipse.equinox.http.servlet.internal.ProxyServlet.processAlias(ProxyServlet.java:126)
        at org.eclipse.equinox.http.servlet.internal.ProxyServlet.service(ProxyServlet.java:76)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:668)
        at org.eclipse.equinox.servletbridge.BridgeServlet.service(BridgeServlet.java:138)
        at com.ibm.team.repository.server.servletbridge.JazzServlet.service(JazzServlet.java:74)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:668)
        at com.ibm.ws.webcontainer.servlet.ServletWrapper.service(ServletWrapper.java:1232)
        at com.ibm.ws.webcontainer.servlet.ServletWrapper.handleRequest(ServletWrapper.java:781)
        at com.ibm.ws.webcontainer.servlet.ServletWrapper.handleRequest(ServletWrapper.java:480)
        at com.ibm.ws.webcontainer.servlet.ServletWrapperImpl.handleRequest(ServletWrapperImpl.java:178)
        at com.ibm.ws.webcontainer.filter.WebAppFilterChain.invokeTarget(WebAppFilterChain.java:136)
        at com.ibm.ws.webcontainer.filter.WebAppFilterChain.doFilter(WebAppFilterChain.java:97)
        at com.ibm.team.repository.server.servletbridge.BridgeFilter.processDelegate(BridgeFilter.java:165)
        at com.ibm.team.repository.server.servletbridge.BridgeFilter.doFilter(BridgeFilter.java:198)
        at com.ibm.ws.webcontainer.filter.FilterInstanceWrapper.doFilter(FilterInstanceWrapper.java:195)
        at com.ibm.ws.webcontainer.filter.WebAppFilterChain.doFilter(WebAppFilterChain.java:91)
        at com.ibm.ws.webcontainer.filter.WebAppFilterManager.doFilter(WebAppFilterManager.java:967)
        at com.ibm.ws.webcontainer.filter.WebAppFilterManager.invokeFilters(WebAppFilterManager.java:1107)
        at com.ibm.ws.webcontainer.webapp.WebApp.handleRequest(WebApp.java:3928)
        at com.ibm.ws.webcontainer.webapp.WebGroup.handleRequest(WebGroup.java:304)
        at com.ibm.ws.webcontainer.WebContainer.handleRequest(WebContainer.java:1007)
        at com.ibm.ws.webcontainer.WSWebContainer.handleRequest(WSWebContainer.java:1817)
        at com.ibm.ws.webcontainer.channel.WCChannelLink.ready(WCChannelLink.java:200)
        at com.ibm.ws.http.channel.inbound.impl.HttpInboundLink.handleDiscrimination(HttpInboundLink.java:463)
        at com.ibm.ws.http.channel.inbound.impl.HttpInboundLink.handleNewRequest(HttpInboundLink.java:530)
        at com.ibm.ws.http.channel.inbound.impl.HttpInboundLink.processRequest(HttpInboundLink.java:316)
        at com.ibm.ws.http.channel.inbound.impl.HttpICLReadCallback.complete(HttpICLReadCallback.java:88)
        at com.ibm.ws.ssl.channel.impl.SSLReadServiceContext$SSLReadCompletedCallback.complete(SSLReadServiceContext.java:1820)
        at com.ibm.ws.tcp.channel.impl.AioReadCompletionListener.futureCompleted(AioReadCompletionListener.java:175)
        at com.ibm.io.async.AbstractAsyncFuture.invokeCallback(AbstractAsyncFuture.java:217)
        at com.ibm.io.async.AsyncChannelFuture.fireCompletionActions(AsyncChannelFuture.java:161)
        at com.ibm.io.async.AsyncFuture.completed(AsyncFuture.java:138)
        at com.ibm.io.async.ResultHandler.complete(ResultHandler.java:204)
        at com.ibm.io.async.ResultHandler.runEventProcessingLoop(ResultHandler.java:775)
        at com.ibm.io.async.ResultHandler$2.run(ResultHandler.java:905)
        at com.ibm.ws.util.ThreadPool$Worker.run(ThreadPool.java:1881)
        at com.ibm.team.repository.common.internal.marshal.util.MarshallerUtil.decodeExceptions(MarshallerUtil.java:369)
        at com.ibm.team.repository.common.internal.marshal.util.MarshallerUtil.decodeExceptions(MarshallerUtil.java:339)
        at com.ibm.team.repository.common.internal.marshal.util.MarshallerUtil.decodeFault(MarshallerUtil.java:304)
        at com.ibm.team.repository.transport.client.RemoteTeamService.constructExceptionFromFault(RemoteTeamService.java:717)
        at com.ibm.team.repository.transport.client.RemoteTeamService.executeMethod(RemoteTeamService.java:560)
        at com.ibm.team.repository.transport.client.RemoteTeamService.invoke(RemoteTeamService.java:202)
        at com.ibm.team.repository.transport.client.ServiceInvocationHandler.invoke(ServiceInvocationHandler.java:43)
        at com.sun.proxy.$Proxy17.repairMultipleVersionsMarkedAsCurrent(Unknown Source)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at com.ibm.team.repository.client.internal.ServiceInterfaceProxy.invokeServiceCall(ServiceInterfaceProxy.java:254)
        at com.ibm.team.repository.client.internal.ServiceInterfaceProxy.invoke(ServiceInterfaceProxy.java:110)
        at com.sun.proxy.$Proxy17.repairMultipleVersionsMarkedAsCurrent(Unknown Source)
        at com.ibm.team.repotools.commands.remote.internal.RepairMultipleVersionsMarkedAsCurrentCommand.execute(RepairMultipleVersionsMarkedAsCurrentCommand.java:51)
        at com.ibm.team.repotools.command.AbstractCommand.execute(AbstractCommand.java:68)
        at com.ibm.team.repotools.rcp.internal.RepositoryToolsApplication.run(RepositoryToolsApplication.java:833)
        at com.ibm.team.repotools.rcp.internal.RepositoryToolsApplication.start(RepositoryToolsApplication.java:908)
        at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
        at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
        at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
        at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:369)
        at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:179)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:620)
        at org.eclipse.equinox.launcher.Main.basicRun(Main.java:575)
        at org.eclipse.equinox.launcher.Main.run(Main.java:1408)
        at org.eclipse.equinox.launcher.Main.main(Main.java:1384)


Any help appericated as I can not upgrade to 6.0.4 until this is run successful.

This is running on WAS 8.5.11 with Java 7. and Yes I have cleared all the cashes & run repotools-xx.sh -clean