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question asked: Dec 10 '14, 11:52 a.m.
question was seen: 2,920 times
last updated: Dec 11 '14, 12:38 p.m.

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Cannot register the jazz reporting service

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Subba Raju Datla (5●1●4●7) | asked Dec 10 '14, 11:52 a.m.
JAZZ DEVELOPER
Setup:
CLM 5.0.2 RC1
Tomcat
SQL Server 2012
JRS
Windows 2008 R2 server

When trying to register the JRS application I am getting this error.

Dec 10, 2014 11:32:41 AM org.apache.catalina.core.StandardWrapperValve invoke
SEVERE: Servlet.service() for servlet [JtsRegistrationServlet] in context with path [/rs] threw exception
Throwable occurred: com.hp.hpl.jena.tdb.TDBException: Root blocks must be at position zero (got 2048)
at com.hp.hpl.jena.tdb.index.bplustree.BPTreeNodeMgr.createEmptyBPT(BPTreeNodeMgr.java:55)
at com.hp.hpl.jena.tdb.index.bplustree.BPlusTree.createIfAbsent(BPlusTree.java:215)
at com.hp.hpl.jena.tdb.index.bplustree.BPlusTree.create(BPlusTree.java:141)
at com.hp.hpl.jena.tdb.setup.Builder$RangeIndexBuilderStd.createBPTree(Builder.java:167)
at com.hp.hpl.jena.tdb.setup.Builder$RangeIndexBuilderStd.buildRangeIndex(Builder.java:134)
at com.hp.hpl.jena.tdb.setup.Builder$TupleIndexBuilderStd.buildTupleIndex(Builder.java:64)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.makeTupleIndex(DatasetBuilderStd.java:270)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.makeTupleIndexes(DatasetBuilderStd.java:259)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.makeTupleIndexes(DatasetBuilderStd.java:248)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.makeQuadTable(DatasetBuilderStd.java:198)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd._build(DatasetBuilderStd.java:146)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.build(DatasetBuilderStd.java:131)
at com.hp.hpl.jena.tdb.setup.DatasetBuilderStd.build(DatasetBuilderStd.java:66)
at com.hp.hpl.jena.tdb.StoreConnection.make(StoreConnection.java:216)
at com.hp.hpl.jena.tdb.transaction.DatasetGraphTransaction.<init>(DatasetGraphTransaction.java:75)
at com.hp.hpl.jena.tdb.sys.TDBMaker._create(TDBMaker.java:57)
at com.hp.hpl.jena.tdb.sys.TDBMaker.createDatasetGraphTransaction(TDBMaker.java:45)
at com.hp.hpl.jena.tdb.TDBFactory._createDatasetGraph(TDBFactory.java:104)
at com.hp.hpl.jena.tdb.TDBFactory.createDatasetGraph(TDBFactory.java:73)
at com.hp.hpl.jena.tdb.TDBFactory.createDataset(TDBFactory.java:52)
at com.hp.hpl.jena.tdb.TDBFactory.createDataset(TDBFactory.java:48)
at com.ibm.team.integration.reporting.model.stores.TDBResourceStore.<init>(TDBResourceStore.java:118)
at com.ibm.team.integration.reporting.model.extensions.ModelContextBuilderExtender.setupDB(ModelContextBuilderExtender.java:109)
at com.ibm.team.integration.reporting.model.extensions.ModelContextBuilderExtender.updateServletContextByJTSRegistration(ModelContextBuilderExtender.java:80)
at com.ibm.team.integration.reporting.common.configs.BaseContextBuilder.updateServletContextByJTSRegistration(BaseContextBuilder.java:83)
at com.ibm.team.integration.reporting.common.extensions.BaseJtsRegistrationHandler.setupConfiguration(BaseJtsRegistrationHandler.java:74)
at com.ibm.team.integration.reporting.common.services.JtsRegistrationServlet.doPost(JtsRegistrationServlet.java:49)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:646)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:727)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at com.ibm.team.integration.reporting.common.services.EncodingFilter.doFilter(EncodingFilter.java:82)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:610)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
at org.apache.catalina.authenticator.SingleSignOn.invoke(SingleSignOn.java:312)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1040)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:607)
at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.lang.Thread.run(Thread.java:761)

I initially ran into a "out of disk space" error. After clearing some space I see this now.

Accepted answer

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Kevin Cornell (541●1) | answered Dec 10 '14, 1:21 p.m.
It looks like the Jena storage hierarchy for JRS was corrupted when it ran out of disk space. Try the following:
1) Stop the JRS server.
2) In the <JRSinstallDir>/server/conf/rs folder, delete the "db" subfolder.
3) Start the JRS server and try the registration again.
Subba Raju Datla selected this answer as the correct answer
Comments
Subba Raju Datla commented Dec 11 '14, 12:38 p.m.
JAZZ DEVELOPER

 That worked. Thank you for your assistance.

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